gbtlite - Visualize metagenomes in a web browser

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Instructions: Load coverage statistics ("covstats") file produced by the read mapper (but first remove # character from header line). See demo data for examples. Click "Draw graphs" after loading file. Mouseover on coverage-GC plot gives info on individual contigs. Click and drag to pan, use mouse scrollwheel to zoom. More documentation on GitHub repository page.

Caution: Performance will slow and browser may hang at >1000 data points.

Download demo data: gutless oligochaete, subsample (ref) | artificial metagenome (ref)


Filter by contig length:

Adjust plot point size:

Y-axis scale:

Coverage-GC plot

Contig length